| Gene Name | Gene Symbol | Locus ID | References |
| CD44 antigen (homing function and Indian blood group system) | CD44 | 960 | 6 |
| cyclin-dependent kinase inhibitor 1B (p27, Kip1) | CDKN1B | 1027 | 3 |
| cadherin 1, type 1, E-cadherin (epithelial) | CDH1 | 999 | 9 |
| bone morphogenetic protein 6 | BMP6 | 654 | 1 |
| gamma-glutamyltransferase 1 | GGT1 | 2678 | 1 |
| Fas (TNFRSF6) associated factor 1 | FAF1 | 11124 | 1 |
| adenomatosis polyposis coli | APC | 324 | 2 |
| cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4) | CDKN2A | 1029 | 14 |
| membrane metallo-endopeptidase (neutral endopeptidase, enkephalinase, CALLA, CD10) | MME | 4311 | 1 |
| caveolin 1, caveolae protein, 22kD | CAV1 | 857 | 1 |
| cyclin-dependent kinase inhibitor 1A (p21, Cip1) | CDKN1A | 1026 | 3 |
| cadherin 13, H-cadherin (heart) | CDH13 | 1012 | 1 |
| androgen receptor (dihydrotestosterone receptor; testicular feminization; spinal and bulbar muscular atrophy; Kennedy disease) | AR | 367 | 91 |
| estrogen receptor 2 (ER beta) | ESR2 | 2100 | 1 |
| endothelin receptor type B | EDNRB | 1910 | 2 |
| fragile histidine triad gene | FHIT | 2272 | 1 |
| nuclear receptor coactivator 4 | NCOA4 | 8031 | 1 |
| death-associated protein kinase 1 | DAPK1 | 1612 | 1 |
| retinoic acid receptor, beta | RARB | 5915 | 2 |
| kangai 1 (suppression of tumorigenicity 6, prostate; CD82 antigen (R2 leukocyte antigen, antigen detected by monoclonal and antibody IA4)) | KAI1 | 3732 | 4 |
| Ras association (RalGDS/AF-6) domain family 1 | RASSF1 | 11186 | 2 |
| glutathione S-transferase pi | GSTP1 | 2950 | 23 |
| inhibin, alpha | INHA | 3623 | 2 |
| retinoblastoma 1 (including osteosarcoma) | RB1 | 5925 | 5 |
| stathmin 1/oncoprotein 18 | STMN1 | 3925 | 1 |
| progesterone receptor | PGR | 5241 | 1 |
| estrogen receptor 1 | ESR1 | 2099 | 4 |
