Human

Human Kidney Gene DataBase
Name SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1
Symbol SMARCB1
Aliases RDT; INI1; SNF5; Snr1; BAF47; Sfh1p; hSNFS; SNF5L1; integrase interactor 1; sucrose nonfermenting, yeast, homolog-like 1
Gene Product
  • SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1
Category
UniGene Hs.512700 
Reference Sequence
mRNA: NM_003073 Protein: NP_003064
OMIM and SNP
OMIM: 601607 SNP: NCBI SNP
Locus
LocusLink: 6598Chromosome: 22Cytoband: 22q11.23 UCSC Genome Map Eesembl Genome Map
Gene Ontology
Expression
EST (510 ESTs, 213 libraries)
Tissue Breadth ? CPM ?
bloodBreadth of expression: 3 out of 32 libraries express this gene (9.38%)Average CPM:0.26
boneBreadth of expression: 6 out of 24 libraries express this gene (25.00%)Average CPM:1.39
brainBreadth of expression: 18 out of 759 libraries express this gene (2.37%)Average CPM:2.00
cartilageBreadth of expression: 3 out of 16 libraries express this gene (18.75%)Average CPM:0.75
cervixBreadth of expression: 2 out of 11 libraries express this gene (18.18%)Average CPM:7.72
colonBreadth of expression: 13 out of 930 libraries express this gene (1.40%)Average CPM:23.07
embryoBreadth of expression: 1 out of 4 libraries express this gene (25.00%)Average CPM:0.72
esophagusBreadth of expression: 1 out of 8 libraries express this gene (12.50%)Average CPM:0.71
eyeBreadth of expression: 7 out of 24 libraries express this gene (29.17%)Average CPM:1.06
germ cellBreadth of expression: 1 out of 6 libraries express this gene (16.67%)Average CPM:0.05
head and neckBreadth of expression: 5 out of 680 libraries express this gene (0.74%)Average CPM:36.31
heartBreadth of expression: 3 out of 26 libraries express this gene (11.54%)Average CPM:5.19
kidneyBreadth of expression: 2 out of 145 libraries express this gene (1.38%)Average CPM:0.14
liverBreadth of expression: 5 out of 65 libraries express this gene (7.69%)Average CPM:0.29
lungBreadth of expression: 16 out of 334 libraries express this gene (4.79%)Average CPM:0.55
lymph nodeBreadth of expression: 9 out of 22 libraries express this gene (40.91%)Average CPM:16.50
mammary glandBreadth of expression: 9 out of 1038 libraries express this gene (0.87%)Average CPM:1.34
muscleBreadth of expression: 3 out of 83 libraries express this gene (3.61%)Average CPM:0.40
nervousBreadth of expression: 7 out of 21 libraries express this gene (33.33%)Average CPM:1.90
oral cavityBreadth of expression: 1 out of 13 libraries express this gene (7.69%)Average CPM:0.57
ovaryBreadth of expression: 6 out of 170 libraries express this gene (3.53%)Average CPM:0.23
pancreasBreadth of expression: 3 out of 20 libraries express this gene (15.00%)Average CPM:0.66
placentaBreadth of expression: 10 out of 358 libraries express this gene (2.79%)Average CPM:0.13
prostateBreadth of expression: 4 out of 309 libraries express this gene (1.29%)Average CPM:0.26
skinBreadth of expression: 4 out of 38 libraries express this gene (10.53%)Average CPM:0.10
stomachBreadth of expression: 7 out of 310 libraries express this gene (2.26%)Average CPM:0.37
synoviumBreadth of expression: 1 out of 8 libraries express this gene (12.50%)Average CPM:1.52
testisBreadth of expression: 6 out of 180 libraries express this gene (3.33%)Average CPM:0.31
thymusBreadth of expression: 1 out of 23 libraries express this gene (4.35%)Average CPM:1.86
uncharacterized tissueBreadth of expression: 43 out of 1739 libraries express this gene (2.47%)Average CPM:0.17
uterusBreadth of expression: 8 out of 236 libraries express this gene (3.39%)Average CPM:0.19
vascularBreadth of expression: 1 out of 18 libraries express this gene (5.56%)Average CPM:5.70
whole bodyBreadth of expression: 1 out of 12 libraries express this gene (8.33%)Average CPM:0.16
EvidenceMutation in Kidney Neoplasms

Other key publications related to this gene

© 2004, KGDB, All Rights Reserved.
Department of Urology
University of California, San Francisco